A handy feature of the energyAware Commander is that it has several available functions from the command line. This is handy if you want to make scripts for programming etc. using the Commander. 

Type the following in your command prompt for a help section to see which commands are available:

"C:\Users\<username>\AppData\Roaming\energymicro\energyAware Commander\eACommander.exe" -h

As an example,you can set the debug mode to of your kit to "output" by writing this:

"C:\Users\<username>\AppData\Roaming\energymicro\energyAware Commander\eACommander.exe" --mode out